Personal version of mDAG (running on a Linux computer)

The followings are needed for a personal Linux-version of mDAG, please choose a proper package for your computer: Installing mDAG:
  • Install Python, Graphviz.
  • Download the mDAG software and extract into a directory, for example /home/, the result will be the directory /home/mdag
  • Go to /home/mdag and run mDAG internal server as following: python web2py.py
  • Enter a password for this server and press "start server", the mdag website will display in your default web browser.
  • Follow the instruction in the website.

Sample datasets:

We supply here some sample datasets (text files):
Dataset Description
(1) 100genes-4treats-5reps.txt Samle dataset 1 (100 genes, 4 treatments, 5 replicates per treatment)
(2) 1000genes-4treats-5reps.txt Samle dataset 2 (1000 genes, 4 treatments, 5 replicates per treatment)
(3) 5000genes-4treats-5reps.txt Samle dataset 3 (5000 genes, 4 treatments, 5 replicates per treatment)
(4) 12906genes-4treats-5reps.txt Real dataset (12906 genes, 4 treatments, 5 replicates per treatment)

Additional data sets (they should be adapted to mDAG format).